1. Abdul-Muneer, P.M., 2014. Application of microsatellite markers in conservation genetics and fisheries management: recent advances in population structure analysis and conservation strategies. Genetics research international, 2014. Article ID 691759. 11pp. [ DOI:10.1155/2014/691759] [ PMID] [ PMCID] 2. Adiputra, Y.T., Chuang, J.L. and Gwo, J.C., 2012. Genetic diversity of Indonesia milkfish (Chanos chanos) using amplified fragment length polymorphism (AFLP) analysis. African Journal of Biotechnology, 11(13), 3055-3060. [ DOI:10.5897/AJB10.1985] 3. Aho, T., Rönn, J., Piironen, J. and Björklund, M., 2006. Impacts of effective population size on genetic diversity in hatchery reared Brown trout (Salmo trutta L.) populations. Aquaculture, 253(1-4), 244-248. [ DOI:10.1016/j.aquaculture.2005.09.013] 4. Avise, J.C., Jones, A.G., Walker, D., DeWoody, J.A. and collaborators4, 2002. Genetic mating systems and reproductive natural histories of fishes: lessons for ecology and evolution. Annual review of genetics, 36(1), 19-45. [ DOI:10.1146/annurev.genet.36.030602.090831] [ PMID] 5. Bártfai, R., Egedi, S., Yue, G.H., Kovács, B., Urbányi, B., Tamás, G., Horváth, L. and Orbán, L., 2003. Genetic analysis of two common carp broodstocks by RAPD and microsatellite markers. Aquaculture, 219(1-4), 157-167. [ DOI:10.1016/S0044-8486(02)00571-9] 6. Benbouza, H., Jacquemin, J.M., Baudoin, J.P. and Mergeai, G., 2006. Optimization of a reliable, fast, cheap and sensitive silver staining method to detect SSR markers in polyacrylamide gels. Biotechnologie, agronomie, société et environnement, 10(2), 77-81. 7. Briñez R, B., Caraballo O, X. and Salazar V, M., 2011. Genetic diversity of six populations of red hybrid tilapia, using microsatellites genetic markers. Revista MVZ Córdoba, 16(2), 2491-2498. [ DOI:10.21897/rmvz.1010] 8. Castro, J., Pino, A., Hermida, M., Bouza, C., Chavarrías, D., Merino, P., Sánchez, L. and Martínez, P., 2007. A microsatellite marker tool for parentage assessment in gilthead seabream (Sparus aurata). Aquaculture, 272, 210-216. [ DOI:10.1016/j.aquaculture.2007.08.020] 9. Chevassus, B., 1989. Aspects génétiques de la constitution de populations d'élevage destinées au repeuplement. Bulletin Français de la Pêche et de la Pisciculture, (314), 146-168. [ DOI:10.1051/kmae:1989010] 10. Coughlan, J.P., Imsland, A.K., Galvin, P.T., Fitzgerald, R.D., Naevdal, G. and Cross, T.F., 1998. Microsatellite DNA variation in wild populations and farmed strains of turbot from Ireland and Norway: a preliminary study. Journal of Fish Biology, 52(5), 916-922. [ DOI:10.1111/j.1095-8649.1998.tb00592.x] 11. DeWoody, J.A. and Avise, J.C., 2000. Microsatellite variation in marine, freshwater and anadromous fishes compared with other animals. Journal of fish biology, 56(3), 461-473. [ DOI:10.1111/j.1095-8649.2000.tb00748.x] 12. DeWoody, J.A. and Avise, J.C., 2001. Genetic perspectives on the natural history of fish mating systems. Journal of Heredity, 92(2), 167-172. [ DOI:10.1093/jhered/92.2.167] [ PMID] 13. Estoup, A., Largi Estoup, A.C.R.L., 1996. Rapid one-tube extraction for reliable PCR detection of fish polymorphic markers and transgenes. Mol Mar Biol Biotechnol, 5(4), 295-298. 14. Falconer, D.S., 1989. Introduction to quantitative genetics 3rd ed. Harlow Longman Scientific & Technical. 15. Fessehaye, Y., El-bialy, Z., Rezk, M.A., Crooijmans, R., Bovenhuis, H. and Komen, H., 2006. Mating systems and male reproductive success in Nile tilapia (Oreochromis niloticus) in breeding hapas: a microsatellite analysis. Aquaculture, 256(1-4), 148-158. [ DOI:10.1016/j.aquaculture.2006.02.024] 16. Frost, L.A., Evans, B.S. and Jerry, D.R., 2006. Loss of genetic diversity due to hatchery culture practices in barramundi (Lates calcarifer). Aquaculture, 261(3), 1056-1064. [ DOI:10.1016/j.aquaculture.2006.09.004] 17. Gheyas, A.A., Cairney, M., Gilmour, A.E., Sattar, M.A., Das, T.K., McAndrew, B.J., Penman, D.J. and Taggart, J.B., 2006. Characterization of microsatellite loci in silver carp (Hypophthalmichthys molitrix), and cross‐amplification in other cyprinid species. Molecular Ecology Notes, 6(3), 656-659. [ DOI:10.1111/j.1471-8286.2006.01288.x] 18. Gheyas, A.A., Woolliams, J.A., Taggart, J.B., Sattar, M.A., Das, T.K., McAndrew, B.J. and Penman, D.J., 2009. Heritability estimation of silver carp (Hypophthalmichthys molitrix) harvest traits using microsatellite based parentage assignment. Aquaculture, 294(3-4), 187-193. [ DOI:10.1016/j.aquaculture.2009.06.013] 19. Gowaty, P.A., 1994. Architects of sperm competition. Trends in Ecology & Evolution, 9(5), 160-162. [ DOI:10.1016/0169-5347(94)90076-0] [ PMID] 20. Hadi Alavi, S.M., Jorfi, E., Hatef, A. and Saheb Mortezavi, S.A., 2010. Sperm motility and seminal plasma characteristics in Barbus sharpeyi (Günther, 1874). Aquaculture research, 41(10), e688-e694. [ DOI:10.1111/j.1365-2109.2010.02600.x] 21. Hansen, M.M., 2002. Estimating the long‐term effects of stocking domesticated trout into wild brown trout (Salmo trutta) populations: An approach using microsatellite DNA analysis of historical and contemporary samples. Molecular Ecology, 11(6), 1003-1015. [ DOI:10.1046/j.1365-294X.2002.01495.x] [ PMID] 22. Hansson, B., Westerdahl, H., Hasselquist, D., Akesson, M. and Bensch, S., 2004. Does linkage disequilibrium generate heterozygosity‐fitness correlations in great reed warblers? Evolution, 58(4), 870-879. [ DOI:10.1111/j.0014-3820.2004.tb00418.x] [ PMID] 23. Hedrick, P.W., 2004. Recent developments in conservation genetics. Journal of Forest Ecology and Management, 197(1-3), 3-19. [ DOI:10.1016/j.foreco.2004.05.002] 24. Herbinger, C.M., Doyle, R.W., Pitman, E.R., Paquet, D., Mesa, K.A., Morris, D.B., Wright, J.M. and Cook, D., 1995. DNA fingerprint based analysis of paternal and maternal effects on offspring growth and survival in communally reared rainbow trout. Aquaculture, 137(1-4), 245-256. [ DOI:10.1016/0044-8486(95)01109-9] 25. Hillis, D.M., Moritz, C. and Mable, B.K., 1996. Molecular Systematics 2nd Edition Sinauer Associates. Sunderland, MA. [ DOI:10.2307/1447682] 26. Horreo, J.L., Machado-Schiaffino, G., Griffiths, A., Bright, D., Stevens, J. and Garcia-Vazquez, E., 2008. Identification of differential broodstock contribution affecting genetic variability in hatchery stocks of Atlantic salmon (Salmo salar). Aquaculture, 280(1-4), 89-93. [ DOI:10.1016/j.aquaculture.2008.05.004] 27. Horváth, L., Tamás, G., Coche, A.G., Kovács, E., Moth-Poulsen, T. and Woynarovich, A., 2015. Training manual on the artificial propagation of carps. A handout for on-farm training workshops on artificial propagation of common carp and Chinese major carps in Central and Eastern Europe, the Caucasus and Central Asia. FAO, Second Edition, 31p. 28. Hulak, M., Kaspar, V., Kohlmann, K., Coward, K., Tešitel, J., Rodina, M., Gela, D., Kocour, M. and Linhart, O., 2010. Microsatellite-based genetic diversity and differentiation of foreign common carp (Cyprinus carpio) strains farmed in the Czech Republic. Aquaculture, 298(3-4), 194-201. [ DOI:10.1016/j.aquaculture.2009.10.021] 29. Jerry, D.R., Preston, N.P., Crocos, P.J., Keys, S., Meadows, J.R. and Li, Y., 2004. Parentage determination of Kuruma shrimp Penaeus (Marsupenaeus) japonicus using microsatellite markers (Bate). Aquaculture, 235(1-4), 237-247. [ DOI:10.1016/j.aquaculture.2004.01.019] 30. Kantartzi, S. K. (2013). Microsatellites: methods and protocols. Springer, New York, 475 p. [ DOI:10.1007/978-1-62703-389-3] 31. Khara, H., Shahrooz, B.N., Hadiseh, D., Rahbar, M., Ahmadnejad, M. and Khodadoost, A., 2012. The effect of cations on sperm motility performance and fertilizing ability of silver carp Hypophtalmychtis molitrix. Acta veterinaria, 62(5-6), 599-609. [ DOI:10.2298/AVB1206599K] 32. Kolar, C.S., Chapman, D.C., Courtenay Jr, W.R., Housel, C.M., Williams, J.D. and Jennings, D.P., 2005. Asian carps of the genus Hypophthalmichthys (Pisces, Cyprinidae) a biological synopsis and environmental risk assessment, Report to U.S. Fish and Wildlife Service per Interagency Agreement 94400-3-0128, 173p. 33. Koljonen, M.L., Pella, J.J. and Masuda, M., 2005. Classical individual assignments versus mixture modeling to estimate stock proportions in Atlantic salmon (Salmo salar) catches from DNA microsatellite data. Canadian Journal of Fisheries and Aquatic Sciences, 62(9), 2143-2158. [ DOI:10.1139/f05-128] 34. Letcher, B.H. and King, T.L., 2001. Parentage and grandparentage assignment with known and unknown matings: application to Connecticut River Atlantic salmon restoration. Canadian Journal of Fisheries and Aquatic Sciences, 58(9), 1812-1821. [ DOI:10.1139/f01-125] 35. Liu, P., Xia, J.H., Lin, G., Sun, F., Liu, F., Lim, H.S., Pang, H.Y. and Yue, G.H., 2012. Molecular parentage analysis is essential in breeding Asian seabass. PloS one, 7(12), p.e51142. [ DOI:10.1371/journal.pone.0051142] [ PMID] [ PMCID] 36. Liu, X., Zhao, G., Wang, Z., Cai, M., Ye, H. and Wang, Q., 2012. Parentage assignment and parental contribution analysis in large yellow croaker Larimichthys crocea using microsatellite markers. Current Zoology, 58(2), 244-249. [ DOI:10.1093/czoolo/58.2.244] 37. Liu, Z.J. and Cordes, J.F., 2004. DNA marker technologies and their applications in aquaculture genetics. Aquaculture, 238(1-4), 1-37. [ DOI:10.1016/j.aquaculture.2004.05.027] 38. Machado-Schiaffino, G., Dopico, E. and Garcia-Vazquez, E., 2007. Genetic variation losses in Atlantic salmon stocks created for supportive breeding. Aquaculture, 264(1-4), 59-65. [ DOI:10.1016/j.aquaculture.2006.12.026] 39. Marshall, T.C., Slate, J.B.K.E., Kruuk, L.E.B. and Pemberton, J.M., 1998. Statistical confidence for likelihood‐based paternity inference in natural populations. Molecular ecology, 7(5), 639-655. [ DOI:10.1046/j.1365-294x.1998.00374.x] [ PMID] 40. Moretzaei, S.R.S., Hooshmand, H., Ahangarzadeh, M., Jorfi E., Dehghan, S.M., Kianersi, F., Tavasoli, M., Soleimani, J., Mohseninejad, L. and Sanjari M., 2011. Investigate warm water fish ponds in order to identify causes of mortalities in Silver carp. General administration of Fisheries in Khouzestan province, 162 p. 41. Motllebi, A., Sharifrohani, M. 2010. Developmental Map for warm water fishes of Iran, Coordination of science and Aquaculture society, First edition, 115 p. (In Persian) 42. Neff, B.D., 2001. Genetic paternity analysis and breeding success in bluegill sunfish (Lepomis macrochirus). Journal of Heredity, 92(2), 111-119. [ DOI:10.1093/jhered/92.2.111] [ PMID] 43. Norris, A.T., Bradley, D.G. and Cunningham, E.P., 2000. Parentage and relatedness determination in farmed Atlantic salmon (Salmo salar) using microsatellite markers. Aquaculture, 182(1-2), 73-83. [ DOI:10.1016/S0044-8486(99)00247-1] 44. O'connell, M. and Wright, J.M., 1997. Microsatellite DNA in fishes. Reviews in fish biology and fisheries, 7, 331-363. [ DOI:10.1023/A:1018443912945] 45. Peakall, R.O.D. and Smouse, P.E., 2006. GENALEX 6: genetic analysis in Excel. Population genetic software for teaching and research. Molecular ecology notes, 6(1), 288-295. [ DOI:10.1111/j.1471-8286.2005.01155.x] 46. Peakall, R.O.D. and Smouse, P.E., 2012. GenAlEx 6.5: genetic analysis in Excel. Population genetic software for teaching and research-an update. Bioinformatics, 28(19), 2537-2539. [ DOI:10.1093/bioinformatics/bts460] [ PMID] [ PMCID] 47. Povh, J.A., Ribeiro, R.P., Sirol, R.N., Streit Jr, D.P., Moreira, H.L.M., Siewerdt, F., Lopera-Barrero, N.M., Mangolin, C.A. and Vargas, L., 2010. Microsatellite analysis of the parental contribution of Piaractus mesopotamicus to the production of offspring in the semi-natural system of reproduction. Brazilian Archives of Biology and Technology, 53, 389-396. [ DOI:10.1590/S1516-89132010000200018] 48. Rahman, M.M., Rahman, M.S. and Hasan, M., 2011. Changes in sperm quality of silver (Hypophthalmichthys molitrix) and bighead carps (Hypophthalmichthys nobilis) during the spawning season. Asian Fisher Sci, 24, 413-425. [ DOI:10.33997/j.afs.2011.24.4.006] 49. Ruzzante, D.E., McCracken, G.R., Parmelee, S., Hill, K., Corrigan, A., MacMillan, J. and Walde, S.J., 2016. Effective number of breeders, effective population size and their relationship with census size in an iteroparous species, Salvelinus fontinalis. Proceedings of the Royal Society B: Biological Sciences, 283(1823), 20152601. [ DOI:10.1098/rspb.2015.2601] [ PMID] [ PMCID] 50. Sourinejad, I., Kalbassi, M.R., Pino-Querido, A., Vera, M., Bouza, C. and Martinez, P., 2011. Parentage assignment of progeny in mixed milt fertilization of Caspian brown trout Salmo trutta caspius using microsatellite DNA markers: Implications for conservation. African Journal of Biotechnology, 10(26), 5084-5090. 51. Subasinghe, R.P., Curry, D., McGladdery, S.E. and Bartley, D., 2003. Recent Technological Innovations in Aquaculture. In: Review of the State of World Aquaculture. FAO Fisheries Circular No.886, Rev. 2, 59-74. 52. Tregenza, T. and Wedell, N., 2000. Genetic compatibility, mate choice and patterns of parentage: invited review. Molecular ecology, 9(8), 1013-1027. [ DOI:10.1046/j.1365-294x.2000.00964.x] [ PMID] 53. Vandeputte, M., Kocour, M., Mauger, S., Dupont-Nivet, M., De Guerry, D., Gela, D., Vallod, D., Linhart, O. and Chevassus, B., 2005. Heritability estimates for growth-related traits using microsatellite parentage assignment in juvenile common carp (Cyprinus carpio L.). Aquaculture, 247, 31-32. [ DOI:10.1016/j.aquaculture.2003.12.019] 54. Vandeputte, M., Rossignol, M.N. and Pincent, C., 2011. From theory to practice: empirical evaluation of the assignment power of marker sets for pedigree analysis in fish breeding. Aquaculture, 314(1-4), 80-86. [ DOI:10.1016/j.aquaculture.2011.01.043] 55. Was, A. and Wenne, R., 2002. Genetic differentiation in hatchery and wild sea trout (Salmo trutta) in the Southern Baltic at microsatellite loci. Aquaculture, 204(3-4), pp.493-506. [ DOI:10.1016/S0044-8486(01)00835-3] 56. Wedekind, C., Rudolfsen, G., Jacob, A., Urbach, D. and Müller, R., 2007. The genetic consequences of hatchery-induced sperm competition in a salmonid. Biological conservation, 137(2), 180-188. [ DOI:10.1016/j.biocon.2007.01.025] 57. Weinman, L.R., Solomon, J.W. and Rubenstein, D.R., 2015. A comparison of single nucleotide polymorphism and microsatellite markers for analysis of parentage and kinship in a cooperatively breeding bird. Molecular ecology resources, 15(3), 502-511. [ DOI:10.1111/1755-0998.12330] [ PMID] 58. Xu, Z., Primavera, J.H., de la Pena, L.D., Pettit, P., Belak, J. and Alcivar-Warren, A., 2001. Genetic diversity of wild and cultured black tiger shrimp (Penaeus monodon) in the Philippines using microsatellites. Aquaculture, 199(1-2), 13-40. [ DOI:10.1016/S0044-8486(00)00535-4] 59. Xue, D., Zhang, T. and Liu, J.X., 2014. Microsatellite evidence for high frequency of multiple paternity in the marine gastropod Rapana venosa. PLoS One, 9(1), p.e86508. [ DOI:10.1371/journal.pone.0086508] [ PMID] [ PMCID] |
.png)
.jpg)
